Sort -g is used to sort numbers in ascending order.
anthony@mtt3:~$ sort --help | egrep "\-g"
-g, --general-numeric-sort compare according to general numerical value
The following one liner iterates over a file with the names of the PDF files and grabs the numbers only with egrep -o and uses sort -g to sort the numbers in ascending order. Then it feeds these numbers to sed and plugs them in. Then rids the output of duplicates with uniq.
In place of uniq, you can also use awk:
awk '!x[$0]++'
The above is equivalent to uniq.
What you're looking for is this one liner:
for i in `cat tmp | egrep -o "[0-9]*" | sort -g`; do cat tmp | sed "s/\(^[a-z]*\)\([0-9]*\)\(\.pdf\)/\1$i\3/g" | uniq; done
Contents of tmp:
anthony@mtt3:~$ cat tmp
cwcch10.pdf
cwcch11.pdf
cwcch12.pdf
cwcch13.pdf
cwcch14.pdf
cwcch15.pdf
cwcch16.pdf
cwcch17.pdf
cwcch18.pdf
cwcch1.pdf
cwcch2.pdf
cwcch3.pdf
cwcch4.pdf
cwcch5.pdf
cwcch6.pdf
cwcch7.pdf
cwcch8.pdf
cwcch9.pdf
EDIT:
Output of command:
anthony@mtt3:~$ for i in `cat tmp | egrep -o "[0-9]*" | sort -g`; do cat tmp | sed "s/\(^[a-z]*\)\([0-9]*\)\(\.pdf\)/\1$i\3/g" | uniq; done
cwcch1.pdf
cwcch2.pdf
cwcch3.pdf
cwcch4.pdf
cwcch5.pdf
cwcch6.pdf
cwcch7.pdf
cwcch8.pdf
cwcch9.pdf
cwcch10.pdf
cwcch11.pdf
cwcch12.pdf
cwcch13.pdf
cwcch14.pdf
cwcch15.pdf
cwcch16.pdf
cwcch17.pdf
cwcch18.pdf