Especially programs that can test to see whether files in two directories are the same file or not.

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Do you mean "What are some command line programs"? Windows 7 has scheduled tasks which fulfil the role of cron. – Richard Jan 20 at 8:46
Try searching on your own before you post stuff. And questions need to be specific. – Shakehar Jan 20 at 8:48
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You must use Task Scheduler, that is on:

Start->All programs->Accessories-> System tools.

And then here you can add a script or program that perform the required operation.

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