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Applications will not show up in Gnome Shell, however they show up on the "Favourites" bar, and can be searched for.

For example, if I search for something spelled incorrectly ("chrmium"), it shows nothing, however, if I search for something correctly ("chromium"), it displays the "Applications" header. This means that it is properly searching for applications, but just not displaying them.

I am running OpenSUSE 12.1 x64 in a Virtual Box VM.

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    Have you checked a suitible .desktop file exists for your application?
    – stsquad
    Jun 22, 2012 at 12:21

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