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There's a lot of lists of places where these files can be found, but can I see the actual list of what is loaded?

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strace startx 2>&1 | grep open – Marco May 12 '12 at 23:03

Xorg keeps it's logs as /var/log/Xorg.x.log

Since the logs record which configuration files are being used, all you have to do is

cat /var/log/Xorg.0.log | grep Using.config

Which will tell you the paths to the config files and the config directory.

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