I'm running Kubuntu 12.04 and have a script written to log into my EC2 server. I would like to automatically have this run in the terminal just by clicking on it. Is this possible to do? I have tried making the default "open with" file the konsole with the run in terminal option selected, but that has not worked yet.
You can't really do this. You'll need to make a .desktop shortcut to it and then modify its properties to run in a terminal. Or you could convert the script to not require a terminal.