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I have builtin SSD which I cannot detach before doing bootrec /fixboot and bootrec /fixmbr

So this commands result in fixing boot sector on builtin SSD not the drive i want.

How to change drive for bootrec /fixboot and bootrec /fixmbr commands?

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You should be able to specify the drive after, ie:

fixboot c:

as shown here.

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"The fixboot command is only available from within the Recovery Console in Windows 2000 and Windows XP." (emphasis added) – accolade Jun 13 '15 at 20:33

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