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I am trying to understand the difference between this windows line ending file:

cmccabe@DTV-A5211QLM:~/Desktop/bed$ head -10 xgen_baits.bed | cat -et
chr1^I955542^I955662^IAGRN_70^I0^I+^M$
chr1^I955643^I955763^IAGRN_71^I0^I+^M$
chr1^I957570^I957690^IAGRN_72^I0^I+^M$

and this unix file:

cmccabe@DTV-A5211QLM:~/Desktop/bed$ head -10 xgen_baits_unix.bed | cat -et
chr1^I955542^I955662^IAGRN_70^I0^I+$
chr1^I955643^I955763^IAGRN_71^I0^I+$
chr1^I957570^I957690^IAGRN_72^I0^I+$

the ^I symbol is tab the $ symbol is newline, but what is the ^I0? Thank you :).

2

I believe the full symbol is just ^I, and what is near is a zero. So your line would be something like this:

chr1<tab>955542<tab>955662<tab>AGRN_70<tab>0<tab>+$

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